Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shtn1Q8K2Q9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Mir8109-201ENSMUST00000184375 117 ntBASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shtn1Q8K2Q9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm24196-201ENSMUST00000179161 110 ntBASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm38241-201ENSMUST00000192641 898 ntBASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shtn1Q8K2Q9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Gm27514-201ENSMUST00000183692 110 ntBASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Gm5425-201ENSMUST00000214125 459 ntBASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Gm24526-201ENSMUST00000082921 158 ntBASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shtn1Q8K2Q9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms