Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Gm18041-201ENSMUST00000218210 618 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.36■□□□□ 0.37
Smc5Q8CG46 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smc5Q8CG46 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Gm38225-201ENSMUST00000194001 393 ntBASIC17.35■□□□□ 0.37
Smc5Q8CG46 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.35■□□□□ 0.37
Smc5Q8CG46 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.35■□□□□ 0.37
Smc5Q8CG46 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.35■□□□□ 0.37
Smc5Q8CG46 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc5Q8CG46 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Gm6222-201ENSMUST00000120787 396 ntBASIC17.34■□□□□ 0.37
Smc5Q8CG46 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.34■□□□□ 0.37
Smc5Q8CG46 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.34■□□□□ 0.37
Smc5Q8CG46 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.34■□□□□ 0.37
Smc5Q8CG46 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc5Q8CG46 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms