Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc60Q8C4J0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc60Q8C4J0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Gm21470-201ENSMUST00000187680 696 ntBASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc60Q8C4J0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Gm15393-201ENSMUST00000120499 219 ntBASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc60Q8C4J0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Ccdc60Q8C4J0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc60Q8C4J0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Mir8102-201ENSMUST00000184148 139 ntBASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms