Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gm22189-201ENSMUST00000103822 86 ntBASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gm9797-201ENSMUST00000052902 613 ntBASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup54Q8BTS4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Syt7-205ENSMUST00000224135 1557 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gm5866-201ENSMUST00000177881 973 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gm6218-201ENSMUST00000219812 628 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Mir497b-201ENSMUST00000093601 125 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup54Q8BTS4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm6912-201ENSMUST00000117218 544 ntBASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm29741-201ENSMUST00000192667 421 ntBASIC14.35□□□□□ -0.11
Nup54Q8BTS4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup54Q8BTS4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms