Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Gm44344-201ENSMUST00000200287 129 ntBASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rab11fip4Q8BQP8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rab11fip4Q8BQP8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Gm13823-201ENSMUST00000119930 345 ntBASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Gm9719-201ENSMUST00000162765 543 ntBASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.58■□□□□ 0.08
Rab11fip4Q8BQP8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Gm24543-201ENSMUST00000103867 82 ntBASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Gm27533-201ENSMUST00000183800 152 ntBASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rab11fip4Q8BQP8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab11fip4Q8BQP8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms