Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Nop53Q8BK35 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nop53Q8BK35 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.06■□□□□ 0
Nop53Q8BK35 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.06■□□□□ 0
Nop53Q8BK35 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nop53Q8BK35 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nop53Q8BK35 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.05■□□□□ 0
Nop53Q8BK35 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.05■□□□□ 0
Nop53Q8BK35 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nop53Q8BK35 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.05■□□□□ -0
Nop53Q8BK35 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.05■□□□□ -0
Nop53Q8BK35 Rpph1-201ENSMUST00000175096 319 ntBASIC15.05■□□□□ -0
Nop53Q8BK35 Gm27494-201ENSMUST00000184735 189 ntBASIC15.05■□□□□ -0
Nop53Q8BK35 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.05■□□□□ -0
Nop53Q8BK35 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nop53Q8BK35 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nop53Q8BK35 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.05■□□□□ -0
Nop53Q8BK35 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.05■□□□□ -0
Nop53Q8BK35 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nop53Q8BK35 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nop53Q8BK35 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Nop53Q8BK35 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Nop53Q8BK35 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nop53Q8BK35 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nop53Q8BK35 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.04■□□□□ -0
Nop53Q8BK35 Mir1895-201ENSMUST00000122615 79 ntBASIC15.04■□□□□ -0
Nop53Q8BK35 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.04■□□□□ -0
Nop53Q8BK35 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nop53Q8BK35 Gm11025-201ENSMUST00000140773 466 ntBASIC15.04■□□□□ -0
Nop53Q8BK35 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms