Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm13453-201ENSMUST00000118708 357 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm12428-201ENSMUST00000119844 727 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm14716-201ENSMUST00000120138 718 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm44344-201ENSMUST00000200287 129 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm46209-201ENSMUST00000217912 553 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.88□□□□□ -0.19
Ubp1Q811S7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubp1Q811S7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.87□□□□□ -0.19
Ubp1Q811S7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Gm6916-202ENSMUST00000205523 195 ntBASIC13.87□□□□□ -0.19
Ubp1Q811S7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.87□□□□□ -0.19
Ubp1Q811S7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.87□□□□□ -0.19
Ubp1Q811S7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubp1Q811S7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ubp1Q811S7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms