Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg9aQ68FE2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg9aQ68FE2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Gm12485-201ENSMUST00000119641 291 ntBASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Atg9aQ68FE2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.78■□□□□ 0.28
Atg9aQ68FE2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg9aQ68FE2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms