Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.45□□□□□ -0.74
Foxc1Q61572 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm27920-201ENSMUST00000183953 96 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm29288-201ENSMUST00000191582 901 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm43222-201ENSMUST00000199013 603 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm44548-201ENSMUST00000208929 192 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Foxc1Q61572 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.45□□□□□ -0.74
Foxc1Q61572 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Foxc1Q61572 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm43980-201ENSMUST00000204899 1612 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Mir449b-201ENSMUST00000104833 80 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm8749-201ENSMUST00000117737 331 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm38225-201ENSMUST00000194001 393 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm20949-201ENSMUST00000206478 952 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm9182-201ENSMUST00000217829 639 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.44□□□□□ -0.74
Foxc1Q61572 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Foxc1Q61572 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Foxc1Q61572 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Foxc1Q61572 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Foxc1Q61572 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms