Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ift88Q61371 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.54■□□□□ 0.08
Ift88Q61371 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Gm5364-201ENSMUST00000216789 889 ntBASIC15.54■□□□□ 0.08
Ift88Q61371 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.54■□□□□ 0.08
Ift88Q61371 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.54■□□□□ 0.08
Ift88Q61371 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.54■□□□□ 0.08
Ift88Q61371 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ift88Q61371 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ift88Q61371 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ift88Q61371 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.54■□□□□ 0.08
Ift88Q61371 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.54■□□□□ 0.08
Ift88Q61371 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ift88Q61371 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.54■□□□□ 0.08
Ift88Q61371 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ift88Q61371 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.53■□□□□ 0.08
Ift88Q61371 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm15957-201ENSMUST00000118893 974 ntBASIC15.53■□□□□ 0.08
Ift88Q61371 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.53■□□□□ 0.08
Ift88Q61371 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.53■□□□□ 0.08
Ift88Q61371 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.53■□□□□ 0.08
Ift88Q61371 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ift88Q61371 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm44608-201ENSMUST00000206827 855 ntBASIC15.53■□□□□ 0.08
Ift88Q61371 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ift88Q61371 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ift88Q61371 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.52■□□□□ 0.08
Ift88Q61371 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Gm11025-201ENSMUST00000140773 466 ntBASIC15.52■□□□□ 0.08
Ift88Q61371 Gm18737-201ENSMUST00000173594 937 ntBASIC15.52■□□□□ 0.08
Ift88Q61371 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.52■□□□□ 0.08
Ift88Q61371 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ift88Q61371 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.52■□□□□ 0.08
Ift88Q61371 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ift88Q61371 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Ift88Q61371 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ift88Q61371 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.52■□□□□ 0.07
Ift88Q61371 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ift88Q61371 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ift88Q61371 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ift88Q61371 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ift88Q61371 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.51■□□□□ 0.07
Ift88Q61371 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ift88Q61371 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ift88Q61371 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ift88Q61371 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ift88Q61371 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ift88Q61371 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms