Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Mre11Q61216 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Gm6754-201ENSMUST00000117124 913 ntBASIC16.84■□□□□ 0.29
Mre11Q61216 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mre11Q61216 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mre11Q61216 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Mre11Q61216 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mre11Q61216 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Gm15372-201ENSMUST00000120729 834 ntBASIC16.83■□□□□ 0.28
Mre11Q61216 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Gm11780-201ENSMUST00000136880 516 ntBASIC16.83■□□□□ 0.28
Mre11Q61216 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Gm37230-201ENSMUST00000194491 818 ntBASIC16.83■□□□□ 0.28
Mre11Q61216 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mre11Q61216 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mre11Q61216 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.82■□□□□ 0.28
Mre11Q61216 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mre11Q61216 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.82■□□□□ 0.28
Mre11Q61216 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.82■□□□□ 0.28
Mre11Q61216 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Mre11Q61216 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
Mre11Q61216 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Gm37153-201ENSMUST00000193637 231 ntBASIC16.82■□□□□ 0.28
Mre11Q61216 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.82■□□□□ 0.28
Mre11Q61216 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.82■□□□□ 0.28
Mre11Q61216 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mre11Q61216 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mre11Q61216 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Gm27742-201ENSMUST00000184667 60 ntBASIC16.81■□□□□ 0.28
Mre11Q61216 Gm44044-201ENSMUST00000205178 1089 ntBASIC16.81■□□□□ 0.28
Mre11Q61216 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms