Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm13385-201ENSMUST00000121089 220 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm8927-201ENSMUST00000181978 981 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm18018-201ENSMUST00000198273 408 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm5279-201ENSMUST00000199575 745 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm5425-201ENSMUST00000214125 459 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm3222-201ENSMUST00000071282 990 ntBASIC14.37□□□□□ -0.11
Slc6a4Q60857 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm12138-201ENSMUST00000122180 951 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm12091-201ENSMUST00000146791 830 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm8584-201ENSMUST00000171982 758 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Gm8515-201ENSMUST00000194852 576 ntBASIC14.36□□□□□ -0.11
Slc6a4Q60857 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a4Q60857 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gm5354-201ENSMUST00000182417 973 ntBASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gm9908-201ENSMUST00000211534 448 ntBASIC14.35□□□□□ -0.11
Slc6a4Q60857 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms