Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Upf3aQ3ULJ3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.72□□□□□ -0.05
Upf3aQ3ULJ3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm13392-201ENSMUST00000117708 150 ntBASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gm37424-201ENSMUST00000191727 561 ntBASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.71□□□□□ -0.05
Upf3aQ3ULJ3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms