Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.19□□□□□ -0.46
Q3U1D9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Q3U1D9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q3U1D9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Q3U1D9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Gm18905-201ENSMUST00000205454 928 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Gm9908-201ENSMUST00000211534 448 ntBASIC12.18□□□□□ -0.46
Q3U1D9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.18□□□□□ -0.46
Q3U1D9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Q3U1D9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q3U1D9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Q3U1D9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q3U1D9 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.17□□□□□ -0.46
Q3U1D9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.17□□□□□ -0.46
Q3U1D9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.17□□□□□ -0.46
Q3U1D9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.17□□□□□ -0.46
Q3U1D9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Q3U1D9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Q3U1D9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.17□□□□□ -0.46
Q3U1D9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q3U1D9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Q3U1D9 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.16□□□□□ -0.46
Q3U1D9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.16□□□□□ -0.46
Q3U1D9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Q3U1D9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.16□□□□□ -0.46
Q3U1D9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms