Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm8749-201ENSMUST00000117737 331 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm13464-201ENSMUST00000119418 935 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Mir3113-201ENSMUST00000175478 76 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm8597-201ENSMUST00000191525 1109 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12□□□□□ -0.49
Fndc4Q3TR08 AC090659.1-201ENSMUST00000224334 768 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fndc4Q3TR08 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Gm8096-201ENSMUST00000209921 1591 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12□□□□□ -0.49
Fndc4Q3TR08 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fndc4Q3TR08 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm9726-201ENSMUST00000180321 678 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm27301-201ENSMUST00000184012 127 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm8000-201ENSMUST00000188378 592 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm10154-201ENSMUST00000084445 354 ntBASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fndc4Q3TR08 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fndc4Q3TR08 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms