Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm2991-201ENSMUST00000173338 480 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Morn2-202ENSMUST00000227729 656 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.09□□□□□ -0.79
Hspg2Q05793 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hspg2Q05793 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm29741-201ENSMUST00000192667 421 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm37922-201ENSMUST00000195596 455 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm18584-201ENSMUST00000203098 964 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm3508-201ENSMUST00000186012 792 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm26315-201ENSMUST00000083890 321 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm24447-201ENSMUST00000083977 338 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.08□□□□□ -0.8
Hspg2Q05793 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.08□□□□□ -0.8
Hspg2Q05793 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hspg2Q05793 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Mir6927-201ENSMUST00000184494 71 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.07□□□□□ -0.8
Hspg2Q05793 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.07□□□□□ -0.8
Hspg2Q05793 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hspg2Q05793 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms