Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm5479-201ENSMUST00000160578 435 ntBASIC15□□□□□ -0.01
VcpQ01853 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15□□□□□ -0.01
VcpQ01853 AY702102-202ENSMUST00000194651 1173 ntBASIC15□□□□□ -0.01
VcpQ01853 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VcpQ01853 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15□□□□□ -0.01
VcpQ01853 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VcpQ01853 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VcpQ01853 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VcpQ01853 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VcpQ01853 Gm17150-201ENSMUST00000165577 381 ntBASIC14.99□□□□□ -0.01
VcpQ01853 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VcpQ01853 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VcpQ01853 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcpQ01853 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
VcpQ01853 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.98□□□□□ -0.01
VcpQ01853 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VcpQ01853 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Gm45668-201ENSMUST00000211271 493 ntBASIC14.98□□□□□ -0.01
VcpQ01853 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.98□□□□□ -0.01
VcpQ01853 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VcpQ01853 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
VcpQ01853 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcpQ01853 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VcpQ01853 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VcpQ01853 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VcpQ01853 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
VcpQ01853 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.97□□□□□ -0.01
VcpQ01853 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.97□□□□□ -0.01
VcpQ01853 Gm11425-201ENSMUST00000119608 498 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.97□□□□□ -0.01
VcpQ01853 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Gm42612-201ENSMUST00000197986 623 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Gm43170-201ENSMUST00000199827 612 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VcpQ01853 Gm9396-201ENSMUST00000076703 567 ntBASIC14.97□□□□□ -0.01
VcpQ01853 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcpQ01853 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms