Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.34□□□□□ -0.91
PrkdcP97313 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm43423-201ENSMUST00000198390 2094 ntBASIC9.34□□□□□ -0.91
PrkdcP97313 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
PrkdcP97313 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.33□□□□□ -0.92
PrkdcP97313 Gm12795-201ENSMUST00000117594 539 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Gm13875-201ENSMUST00000120162 282 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PrkdcP97313 Ntng1-201ENSMUST00000051253 327 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.33□□□□□ -0.92
PrkdcP97313 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.33□□□□□ -0.92
PrkdcP97313 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
PrkdcP97313 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PrkdcP97313 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
PrkdcP97313 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.33□□□□□ -0.92
PrkdcP97313 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PrkdcP97313 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 AC133083.1-201ENSMUST00000221736 2209 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
PrkdcP97313 Gm23270-201ENSMUST00000104055 131 ntBASIC9.33□□□□□ -0.92
PrkdcP97313 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
PrkdcP97313 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PrkdcP97313 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
PrkdcP97313 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Gm25880-201ENSMUST00000104331 132 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.32□□□□□ -0.92
PrkdcP97313 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Gm25700-201ENSMUST00000177693 110 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.32□□□□□ -0.92
PrkdcP97313 Arhgef33-207ENSMUST00000224966 490 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
PrkdcP97313 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm16397-201ENSMUST00000122201 494 ntBASIC9.32□□□□□ -0.92
PrkdcP97313 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.32□□□□□ -0.92
PrkdcP97313 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PrkdcP97313 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms