Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shox2P70390 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shox2P70390 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shox2P70390 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shox2P70390 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shox2P70390 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.89□□□□□ -0.19
Shox2P70390 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Gm15565-201ENSMUST00000118890 427 ntBASIC13.88□□□□□ -0.19
Shox2P70390 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.88□□□□□ -0.19
Shox2P70390 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shox2P70390 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shox2P70390 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shox2P70390 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shox2P70390 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Shox2P70390 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Shox2P70390 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shox2P70390 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Shox2P70390 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Shox2P70390 Mir6982-201ENSMUST00000184354 68 ntBASIC13.87□□□□□ -0.19
Shox2P70390 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.87□□□□□ -0.19
Shox2P70390 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.87□□□□□ -0.19
Shox2P70390 Gm7787-201ENSMUST00000216858 688 ntBASIC13.87□□□□□ -0.19
Shox2P70390 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.87□□□□□ -0.19
Shox2P70390 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shox2P70390 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.87□□□□□ -0.19
Shox2P70390 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shox2P70390 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.86□□□□□ -0.19
Shox2P70390 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.86□□□□□ -0.19
Shox2P70390 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shox2P70390 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.86□□□□□ -0.19
Shox2P70390 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.86□□□□□ -0.19
Shox2P70390 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms