Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Hmgb1P63158 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hmgb1P63158 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hmgb1P63158 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hmgb1P63158 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hmgb1P63158 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Hmgb1P63158 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Hmgb1P63158 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.47■□□□□ 0.07
Hmgb1P63158 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.47■□□□□ 0.07
Hmgb1P63158 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Mir1895-201ENSMUST00000122615 79 ntBASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.47■□□□□ 0.07
Hmgb1P63158 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.47■□□□□ 0.07
Hmgb1P63158 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.47■□□□□ 0.07
Hmgb1P63158 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hmgb1P63158 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
Hmgb1P63158 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgb1P63158 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Gm8000-201ENSMUST00000188378 592 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Gm6443-201ENSMUST00000203599 874 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Gm44771-201ENSMUST00000206975 626 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 BC001981-202ENSMUST00000191393 1545 ntBASIC15.46■□□□□ 0.07
Hmgb1P63158 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Hmgb1P63158 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgb1P63158 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgb1P63158 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgb1P63158 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Hmgb1P63158 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgb1P63158 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgb1P63158 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.46■□□□□ 0.06
Hmgb1P63158 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.45■□□□□ 0.06
Hmgb1P63158 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgb1P63158 Gm6222-201ENSMUST00000120787 396 ntBASIC15.45■□□□□ 0.06
Hmgb1P63158 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hmgb1P63158 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms