Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.23□□□□□ -0.45
Uba52P62984 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Gm45612-201ENSMUST00000211320 160 ntBASIC12.23□□□□□ -0.45
Uba52P62984 Gm45747-201ENSMUST00000212203 999 ntBASIC12.23□□□□□ -0.45
Uba52P62984 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Uba52P62984 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Uba52P62984 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Uba52P62984 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
Uba52P62984 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.22□□□□□ -0.45
Uba52P62984 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gm44335-201ENSMUST00000196879 141 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Gm44297-201ENSMUST00000198304 141 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Gm44346-201ENSMUST00000198851 141 ntBASIC12.22□□□□□ -0.45
Uba52P62984 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Uba52P62984 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Uba52P62984 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Uba52P62984 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
Uba52P62984 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Uba52P62984 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Uba52P62984 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.21□□□□□ -0.45
Uba52P62984 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Uba52P62984 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Uba52P62984 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Uba52P62984 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms