Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lsm3P62311 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.79□□□□□ -0.36
Lsm3P62311 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm22240-201ENSMUST00000175225 82 ntBASIC12.79□□□□□ -0.36
Lsm3P62311 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm27646-201ENSMUST00000183989 110 ntBASIC12.79□□□□□ -0.36
Lsm3P62311 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.79□□□□□ -0.36
Lsm3P62311 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Lsm3P62311 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lsm3P62311 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lsm3P62311 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm3P62311 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.78□□□□□ -0.36
Lsm3P62311 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.78□□□□□ -0.36
Lsm3P62311 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Lsm3P62311 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.78□□□□□ -0.36
Lsm3P62311 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm3P62311 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm3P62311 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.78□□□□□ -0.36
Lsm3P62311 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.78□□□□□ -0.36
Lsm3P62311 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm3P62311 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm3P62311 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm3P62311 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm3P62311 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm3P62311 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Lsm3P62311 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.77□□□□□ -0.36
Lsm3P62311 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lsm3P62311 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm3P62311 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Lsm3P62311 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm3P62311 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm3P62311 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms