Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lim2P56563 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lim2P56563 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Lim2P56563 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.06□□□□□ -0.16
Lim2P56563 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.06□□□□□ -0.16
Lim2P56563 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Mir8102-201ENSMUST00000184148 139 ntBASIC14.06□□□□□ -0.16
Lim2P56563 Gm6916-202ENSMUST00000205523 195 ntBASIC14.06□□□□□ -0.16
Lim2P56563 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.06□□□□□ -0.16
Lim2P56563 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.06□□□□□ -0.16
Lim2P56563 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lim2P56563 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lim2P56563 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lim2P56563 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lim2P56563 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lim2P56563 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lim2P56563 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Gm14057-201ENSMUST00000120631 482 ntBASIC14.05□□□□□ -0.16
Lim2P56563 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.05□□□□□ -0.16
Lim2P56563 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Gm9229-201ENSMUST00000222777 126 ntBASIC14.05□□□□□ -0.16
Lim2P56563 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.05□□□□□ -0.16
Lim2P56563 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.05□□□□□ -0.16
Lim2P56563 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lim2P56563 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.05□□□□□ -0.16
Lim2P56563 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lim2P56563 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Lim2P56563 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lim2P56563 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.04□□□□□ -0.16
Lim2P56563 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lim2P56563 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.04□□□□□ -0.16
Lim2P56563 Mir7684-201ENSMUST00000183858 60 ntBASIC14.04□□□□□ -0.16
Lim2P56563 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms