Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Nub1P54729 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 AA543401-201ENSMUST00000164248 1269 ntBASIC15.13■□□□□ 0.01
Nub1P54729 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Nub1P54729 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.13■□□□□ 0.01
Nub1P54729 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.13■□□□□ 0.01
Nub1P54729 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.13■□□□□ 0.01
Nub1P54729 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nub1P54729 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nub1P54729 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nub1P54729 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.13■□□□□ 0.01
Nub1P54729 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nub1P54729 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.12■□□□□ 0.01
Nub1P54729 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.12■□□□□ 0.01
Nub1P54729 Gm15920-201ENSMUST00000118998 402 ntBASIC15.12■□□□□ 0.01
Nub1P54729 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.12■□□□□ 0.01
Nub1P54729 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.12■□□□□ 0.01
Nub1P54729 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.12■□□□□ 0.01
Nub1P54729 Gm44872-201ENSMUST00000207864 420 ntBASIC15.12■□□□□ 0.01
Nub1P54729 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.12■□□□□ 0.01
Nub1P54729 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nub1P54729 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nub1P54729 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nub1P54729 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nub1P54729 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.11■□□□□ 0.01
Nub1P54729 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nub1P54729 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.11■□□□□ 0.01
Nub1P54729 Gm6916-202ENSMUST00000205523 195 ntBASIC15.11■□□□□ 0.01
Nub1P54729 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nub1P54729 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.11■□□□□ 0.01
Nub1P54729 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Nub1P54729 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nub1P54729 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nub1P54729 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nub1P54729 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nub1P54729 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gm13453-201ENSMUST00000118708 357 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.1■□□□□ 0.01
Nub1P54729 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gm37444-201ENSMUST00000193605 439 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Gm44344-201ENSMUST00000200287 129 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Gm44608-201ENSMUST00000206827 855 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms