Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh6P54276 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh6P54276 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Msh6P54276 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh6P54276 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Msh6P54276 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Msh6P54276 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Msh6P54276 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Msh6P54276 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.67■□□□□ 0.42
Msh6P54276 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Msh6P54276 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.67■□□□□ 0.42
Msh6P54276 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Msh6P54276 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Msh6P54276 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Msh6P54276 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh6P54276 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.67■□□□□ 0.42
Msh6P54276 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Msh6P54276 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Msh6P54276 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Msh6P54276 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Msh6P54276 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.66■□□□□ 0.42
Msh6P54276 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Msh6P54276 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.66■□□□□ 0.42
Msh6P54276 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.66■□□□□ 0.42
Msh6P54276 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.66■□□□□ 0.42
Msh6P54276 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.66■□□□□ 0.42
Msh6P54276 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.66■□□□□ 0.42
Msh6P54276 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msh6P54276 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Msh6P54276 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Msh6P54276 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Gm5187-201ENSMUST00000117317 991 ntBASIC17.65■□□□□ 0.42
Msh6P54276 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.65■□□□□ 0.42
Msh6P54276 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.65■□□□□ 0.42
Msh6P54276 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Msh6P54276 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.65■□□□□ 0.42
Msh6P54276 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh6P54276 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.64■□□□□ 0.42
Msh6P54276 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms