Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lhx3P50481 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.22□□□□□ -0.13
Lhx3P50481 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.22□□□□□ -0.13
Lhx3P50481 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lhx3P50481 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lhx3P50481 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx3P50481 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lhx3P50481 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx3P50481 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lhx3P50481 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lhx3P50481 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Lhx3P50481 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx3P50481 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lhx3P50481 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Lhx3P50481 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx3P50481 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx3P50481 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx3P50481 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx3P50481 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx3P50481 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx3P50481 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.2□□□□□ -0.14
Lhx3P50481 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Lhx3P50481 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lhx3P50481 Mir698-201ENSMUST00000102164 109 ntBASIC14.2□□□□□ -0.14
Lhx3P50481 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.2□□□□□ -0.14
Lhx3P50481 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Lhx3P50481 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.2□□□□□ -0.14
Lhx3P50481 Gm18905-201ENSMUST00000205454 928 ntBASIC14.2□□□□□ -0.14
Lhx3P50481 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lhx3P50481 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx3P50481 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx3P50481 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.2□□□□□ -0.14
Lhx3P50481 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx3P50481 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lhx3P50481 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.19□□□□□ -0.14
Lhx3P50481 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lhx3P50481 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.19□□□□□ -0.14
Lhx3P50481 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Gm12859-201ENSMUST00000117834 427 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Gm24420-201ENSMUST00000176676 59 ntBASIC14.19□□□□□ -0.14
Lhx3P50481 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.19□□□□□ -0.14
Lhx3P50481 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lhx3P50481 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms