Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Shmt1P50431 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Shmt1P50431 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shmt1P50431 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.85□□□□□ -0.03
Shmt1P50431 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shmt1P50431 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.84□□□□□ -0.03
Shmt1P50431 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Shmt1P50431 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shmt1P50431 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.84□□□□□ -0.03
Shmt1P50431 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.84□□□□□ -0.03
Shmt1P50431 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shmt1P50431 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.84□□□□□ -0.03
Shmt1P50431 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.84□□□□□ -0.03
Shmt1P50431 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shmt1P50431 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shmt1P50431 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Shmt1P50431 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.84□□□□□ -0.03
Shmt1P50431 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shmt1P50431 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shmt1P50431 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.83□□□□□ -0.03
Shmt1P50431 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.83□□□□□ -0.03
Shmt1P50431 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Shmt1P50431 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shmt1P50431 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.83□□□□□ -0.04
Shmt1P50431 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.83□□□□□ -0.04
Shmt1P50431 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.83□□□□□ -0.04
Shmt1P50431 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.83□□□□□ -0.04
Shmt1P50431 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Shmt1P50431 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Shmt1P50431 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shmt1P50431 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.82□□□□□ -0.04
Shmt1P50431 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.82□□□□□ -0.04
Shmt1P50431 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shmt1P50431 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms