Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.48■□□□□ 0.07
Brca1P48754 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.48■□□□□ 0.07
Brca1P48754 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.48■□□□□ 0.07
Brca1P48754 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.48■□□□□ 0.07
Brca1P48754 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.48■□□□□ 0.07
Brca1P48754 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.47■□□□□ 0.07
Brca1P48754 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.47■□□□□ 0.07
Brca1P48754 Gm13297-201ENSMUST00000120205 934 ntBASIC15.47■□□□□ 0.07
Brca1P48754 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Brca1P48754 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.47■□□□□ 0.07
Brca1P48754 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.47■□□□□ 0.07
Brca1P48754 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.47■□□□□ 0.07
Brca1P48754 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Brca1P48754 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Brca1P48754 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.47■□□□□ 0.07
Brca1P48754 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.47■□□□□ 0.07
Brca1P48754 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Brca1P48754 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.47■□□□□ 0.07
Brca1P48754 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.47■□□□□ 0.07
Brca1P48754 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.47■□□□□ 0.07
Brca1P48754 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.47■□□□□ 0.07
Brca1P48754 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.47■□□□□ 0.07
Brca1P48754 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Brca1P48754 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Brca1P48754 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Brca1P48754 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.46■□□□□ 0.07
Brca1P48754 Gm4986-201ENSMUST00000119731 549 ntBASIC15.46■□□□□ 0.07
Brca1P48754 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.46■□□□□ 0.07
Brca1P48754 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.46■□□□□ 0.07
Brca1P48754 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Brca1P48754 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Brca1P48754 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Brca1P48754 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Brca1P48754 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Brca1P48754 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Brca1P48754 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Brca1P48754 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.45■□□□□ 0.06
Brca1P48754 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm11964-201ENSMUST00000120982 444 ntBASIC15.45■□□□□ 0.06
Brca1P48754 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm6222-202ENSMUST00000182143 629 ntBASIC15.45■□□□□ 0.06
Brca1P48754 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.45■□□□□ 0.06
Brca1P48754 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm45186-201ENSMUST00000206874 478 ntBASIC15.45■□□□□ 0.06
Brca1P48754 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Brca1P48754 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Brca1P48754 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.45■□□□□ 0.06
Brca1P48754 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.45■□□□□ 0.06
Brca1P48754 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Brca1P48754 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Brca1P48754 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.45■□□□□ 0.06
Brca1P48754 Gm25668-201ENSMUST00000157700 129 ntBASIC15.45■□□□□ 0.06
Brca1P48754 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms