Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.61□□□□□ -0.55
Hist1h1aP43275 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm5177-201ENSMUST00000183092 997 ntBASIC11.61□□□□□ -0.55
Hist1h1aP43275 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.61□□□□□ -0.55
Hist1h1aP43275 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm45098-201ENSMUST00000207179 657 ntBASIC11.61□□□□□ -0.55
Hist1h1aP43275 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.61□□□□□ -0.55
Hist1h1aP43275 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hist1h1aP43275 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.6□□□□□ -0.55
Hist1h1aP43275 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hist1h1aP43275 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.59□□□□□ -0.55
Hist1h1aP43275 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.59□□□□□ -0.55
Hist1h1aP43275 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hist1h1aP43275 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms