Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdx2P43241 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdx2P43241 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdx2P43241 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Gm43179-201ENSMUST00000198797 275 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdx2P43241 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdx2P43241 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
Cdx2P43241 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdx2P43241 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cdx2P43241 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Gm23931-201ENSMUST00000103842 109 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Gm5187-201ENSMUST00000117317 991 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdx2P43241 Gm22331-201ENSMUST00000158066 136 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Gm5370-201ENSMUST00000187187 574 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Gm43818-201ENSMUST00000200605 466 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdx2P43241 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.28□□□□□ -0.28
Cdx2P43241 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdx2P43241 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdx2P43241 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx2P43241 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx2P43241 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.27□□□□□ -0.28
Cdx2P43241 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdx2P43241 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cdx2P43241 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cdx2P43241 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Cdx2P43241 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.27□□□□□ -0.28
Cdx2P43241 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx2P43241 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx2P43241 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdx2P43241 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdx2P43241 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdx2P43241 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms