Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC20.68■□□□□ 0.9
Chd1P40201 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.68■□□□□ 0.9
Chd1P40201 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chd1P40201 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Chd1P40201 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chd1P40201 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Gm15547-201ENSMUST00000122152 333 ntBASIC20.67■□□□□ 0.9
Chd1P40201 Gm8194-201ENSMUST00000159783 859 ntBASIC20.67■□□□□ 0.9
Chd1P40201 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC20.67■□□□□ 0.9
Chd1P40201 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 CT025694.1-201ENSMUST00000226188 934 ntBASIC20.67■□□□□ 0.9
Chd1P40201 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1P40201 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chd1P40201 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Gm23699-201ENSMUST00000158835 135 ntBASIC20.66■□□□□ 0.9
Chd1P40201 Gm8584-201ENSMUST00000171982 758 ntBASIC20.66■□□□□ 0.9
Chd1P40201 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chd1P40201 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chd1P40201 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1P40201 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chd1P40201 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Gm9279-201ENSMUST00000223175 1606 ntBASIC20.65■□□□□ 0.9
Chd1P40201 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chd1P40201 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC20.65■□□□□ 0.9
Chd1P40201 Gm5950-201ENSMUST00000213337 772 ntBASIC20.65■□□□□ 0.9
Chd1P40201 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chd1P40201 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chd1P40201 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.65■□□□□ 0.9
Chd1P40201 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1P40201 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC20.64■□□□□ 0.9
Chd1P40201 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC20.64■□□□□ 0.9
Chd1P40201 Gm38197-201ENSMUST00000192320 2122 ntBASIC20.64■□□□□ 0.9
Chd1P40201 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC20.64■□□□□ 0.9
Chd1P40201 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chd1P40201 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Chd1P40201 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1P40201 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1P40201 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1P40201 Gm8913-201ENSMUST00000209491 641 ntBASIC20.64■□□□□ 0.89
Chd1P40201 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chd1P40201 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd1P40201 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chd1P40201 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Gm13875-201ENSMUST00000120162 282 ntBASIC20.63■□□□□ 0.89
Chd1P40201 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chd1P40201 Gm2546-201ENSMUST00000182630 991 ntBASIC20.63■□□□□ 0.89
Chd1P40201 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd1P40201 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Chd1P40201 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC20.63■□□□□ 0.89
Chd1P40201 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd1P40201 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1P40201 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Chd1P40201 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms