Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc1P35601 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfc1P35601 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.81□□□□□ -0.04
Rfc1P35601 Gm11764-201ENSMUST00000120221 623 ntBASIC14.81□□□□□ -0.04
Rfc1P35601 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.81□□□□□ -0.04
Rfc1P35601 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.81□□□□□ -0.04
Rfc1P35601 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.81□□□□□ -0.04
Rfc1P35601 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc1P35601 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfc1P35601 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rfc1P35601 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.8□□□□□ -0.04
Rfc1P35601 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rfc1P35601 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rfc1P35601 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rfc1P35601 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Gm13884-201ENSMUST00000118103 829 ntBASIC14.8□□□□□ -0.04
Rfc1P35601 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Gm5864-201ENSMUST00000202263 970 ntBASIC14.8□□□□□ -0.04
Rfc1P35601 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.8□□□□□ -0.04
Rfc1P35601 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.8□□□□□ -0.04
Rfc1P35601 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfc1P35601 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfc1P35601 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfc1P35601 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rfc1P35601 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Rfc1P35601 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc1P35601 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Rfc1P35601 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc1P35601 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc1P35601 Gm10060-201ENSMUST00000212002 111 ntBASIC14.79□□□□□ -0.04
Rfc1P35601 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms