Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Irf8P23611 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Irf8P23611 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Irf8P23611 Mir698-201ENSMUST00000102164 109 ntBASIC15.14■□□□□ 0.01
Irf8P23611 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.14■□□□□ 0.01
Irf8P23611 Gm6912-201ENSMUST00000117218 544 ntBASIC15.14■□□□□ 0.01
Irf8P23611 Gm12151-201ENSMUST00000121374 290 ntBASIC15.14■□□□□ 0.01
Irf8P23611 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.14■□□□□ 0.01
Irf8P23611 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.14■□□□□ 0.01
Irf8P23611 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.14■□□□□ 0.01
Irf8P23611 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Irf8P23611 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Irf8P23611 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Irf8P23611 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.14■□□□□ 0.01
Irf8P23611 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.14■□□□□ 0.01
Irf8P23611 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.14■□□□□ 0.01
Irf8P23611 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.14■□□□□ 0.01
Irf8P23611 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Irf8P23611 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.13■□□□□ 0.01
Irf8P23611 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Gm13385-201ENSMUST00000121089 220 ntBASIC15.13■□□□□ 0.01
Irf8P23611 Gm15487-201ENSMUST00000122373 465 ntBASIC15.13■□□□□ 0.01
Irf8P23611 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Gm44719-201ENSMUST00000206404 149 ntBASIC15.13■□□□□ 0.01
Irf8P23611 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf8P23611 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Irf8P23611 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Irf8P23611 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Irf8P23611 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Irf8P23611 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.12■□□□□ 0.01
Irf8P23611 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Irf8P23611 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Irf8P23611 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf8P23611 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.11■□□□□ 0.01
Irf8P23611 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Irf8P23611 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.11■□□□□ 0.01
Irf8P23611 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf8P23611 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms