Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.83□□□□□ -0.36
Col4a2P08122 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a2P08122 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm27243-201ENSMUST00000183964 521 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Col4a2P08122 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col4a2P08122 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a2P08122 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm7584-201ENSMUST00000175829 940 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a2P08122 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.82□□□□□ -0.36
Col4a2P08122 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col4a2P08122 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a2P08122 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col4a2P08122 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
Col4a2P08122 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Gm15236-201ENSMUST00000117309 379 ntBASIC12.81□□□□□ -0.36
Col4a2P08122 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.81□□□□□ -0.36
Col4a2P08122 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.81□□□□□ -0.36
Col4a2P08122 Gm37259-201ENSMUST00000193903 849 ntBASIC12.81□□□□□ -0.36
Col4a2P08122 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.81□□□□□ -0.36
Col4a2P08122 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a2P08122 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.81□□□□□ -0.36
Col4a2P08122 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
Col4a2P08122 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a2P08122 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a2P08122 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Gm43822-201ENSMUST00000200285 476 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.8□□□□□ -0.36
Col4a2P08122 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a2P08122 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col4a2P08122 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms