Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
P04224 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
P04224 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04224 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.34□□□□□ -0.43
P04224 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.34□□□□□ -0.43
P04224 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.34□□□□□ -0.43
P04224 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.34□□□□□ -0.43
P04224 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.34□□□□□ -0.43
P04224 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.34□□□□□ -0.43
P04224 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.34□□□□□ -0.43
P04224 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.34□□□□□ -0.43
P04224 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04224 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P04224 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
P04224 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.33□□□□□ -0.44
P04224 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
P04224 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
P04224 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
P04224 Gm44357-201ENSMUST00000195897 142 ntBASIC12.33□□□□□ -0.44
P04224 Gm19658-201ENSMUST00000196231 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44367-201ENSMUST00000196836 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44350-201ENSMUST00000197197 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44390-201ENSMUST00000197533 144 ntBASIC12.33□□□□□ -0.44
P04224 Gm6089-201ENSMUST00000197666 938 ntBASIC12.33□□□□□ -0.44
P04224 Gm44313-201ENSMUST00000198018 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44486-201ENSMUST00000198508 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44314-201ENSMUST00000199263 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44394-201ENSMUST00000199558 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44484-201ENSMUST00000199873 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44466-201ENSMUST00000200264 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm44359-201ENSMUST00000200671 138 ntBASIC12.33□□□□□ -0.44
P04224 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Gm18041-201ENSMUST00000218210 618 ntBASIC12.33□□□□□ -0.44
P04224 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
P04224 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.33□□□□□ -0.44
P04224 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
P04224 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
P04224 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.33□□□□□ -0.44
P04224 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04224 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.33□□□□□ -0.44
P04224 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04224 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Grk6-205ENSMUST00000224653 2976 ntBASIC12.32□□□□□ -0.44
P04224 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04224 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04224 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.32□□□□□ -0.44
P04224 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04224 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms