Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm46209-201ENSMUST00000217912 553 ntBASIC14.19□□□□□ -0.14
Chrna4O70174 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.19□□□□□ -0.14
Chrna4O70174 Gm6888-201ENSMUST00000221983 706 ntBASIC14.19□□□□□ -0.14
Chrna4O70174 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chrna4O70174 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna4O70174 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna4O70174 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Chrna4O70174 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna4O70174 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chrna4O70174 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna4O70174 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna4O70174 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Gm13223-201ENSMUST00000118609 747 ntBASIC14.18□□□□□ -0.14
Chrna4O70174 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.18□□□□□ -0.14
Chrna4O70174 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.18□□□□□ -0.14
Chrna4O70174 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chrna4O70174 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna4O70174 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna4O70174 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chrna4O70174 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.17□□□□□ -0.14
Chrna4O70174 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.17□□□□□ -0.14
Chrna4O70174 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.17□□□□□ -0.14
Chrna4O70174 Gm17837-201ENSMUST00000186435 985 ntBASIC14.17□□□□□ -0.14
Chrna4O70174 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.17□□□□□ -0.14
Chrna4O70174 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.17□□□□□ -0.14
Chrna4O70174 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chrna4O70174 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.17□□□□□ -0.14
Chrna4O70174 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.17□□□□□ -0.14
Chrna4O70174 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna4O70174 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.16□□□□□ -0.14
Chrna4O70174 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chrna4O70174 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Gm15653-201ENSMUST00000119247 907 ntBASIC14.16□□□□□ -0.14
Chrna4O70174 Gm37714-201ENSMUST00000194742 342 ntBASIC14.16□□□□□ -0.14
Chrna4O70174 Gm18027-201ENSMUST00000218947 619 ntBASIC14.16□□□□□ -0.14
Chrna4O70174 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms