Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Itgb3O54890 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Itgb3O54890 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Itgb3O54890 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.88□□□□□ -0.03
Itgb3O54890 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Itgb3O54890 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.88□□□□□ -0.03
Itgb3O54890 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.88□□□□□ -0.03
Itgb3O54890 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.88□□□□□ -0.03
Itgb3O54890 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.88□□□□□ -0.03
Itgb3O54890 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Itgb3O54890 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Itgb3O54890 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Itgb3O54890 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Itgb3O54890 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Itgb3O54890 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.87□□□□□ -0.03
Itgb3O54890 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Itgb3O54890 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Itgb3O54890 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.87□□□□□ -0.03
Itgb3O54890 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.87□□□□□ -0.03
Itgb3O54890 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 Gm5425-201ENSMUST00000214125 459 ntBASIC14.87□□□□□ -0.03
Itgb3O54890 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.87□□□□□ -0.03
Itgb3O54890 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Itgb3O54890 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Itgb3O54890 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.87□□□□□ -0.03
Itgb3O54890 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Itgb3O54890 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Itgb3O54890 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Itgb3O54890 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Itgb3O54890 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Itgb3O54890 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.86□□□□□ -0.03
Itgb3O54890 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.86□□□□□ -0.03
Itgb3O54890 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.86□□□□□ -0.03
Itgb3O54890 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.86□□□□□ -0.03
Itgb3O54890 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.86□□□□□ -0.03
Itgb3O54890 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.86□□□□□ -0.03
Itgb3O54890 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.86□□□□□ -0.03
Itgb3O54890 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Itgb3O54890 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Itgb3O54890 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms