Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Gm5354-201ENSMUST00000182417 973 ntBASIC13.8□□□□□ -0.2
Bhlhe40O35185 Gm45384-201ENSMUST00000210451 277 ntBASIC13.8□□□□□ -0.2
Bhlhe40O35185 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.8□□□□□ -0.2
Bhlhe40O35185 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.8□□□□□ -0.2
Bhlhe40O35185 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.8□□□□□ -0.2
Bhlhe40O35185 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bhlhe40O35185 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.79□□□□□ -0.2
Bhlhe40O35185 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.79□□□□□ -0.2
Bhlhe40O35185 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Gm12341-201ENSMUST00000119724 503 ntBASIC13.79□□□□□ -0.2
Bhlhe40O35185 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.79□□□□□ -0.2
Bhlhe40O35185 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bhlhe40O35185 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.78□□□□□ -0.2
Bhlhe40O35185 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Gm15240-201ENSMUST00000118156 720 ntBASIC13.78□□□□□ -0.2
Bhlhe40O35185 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Bhlhe40O35185 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.78□□□□□ -0.2
Bhlhe40O35185 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms