Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm11745-201ENSMUST00000121669 448 ntBASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm24513-201ENSMUST00000174964 138 ntBASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm27397-201ENSMUST00000184997 107 ntBASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh9F8VPK8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Gm14822-201ENSMUST00000122247 291 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Mir1895-201ENSMUST00000122615 79 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 AA619741-201ENSMUST00000195095 646 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh9F8VPK8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh9F8VPK8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh9F8VPK8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Gm6222-201ENSMUST00000120787 396 ntBASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms