Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28043E0CXC2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm4995-201ENSMUST00000117247 432 ntBASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28043E0CXC2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gm11025-201ENSMUST00000140773 466 ntBASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gm44487-201ENSMUST00000205145 325 ntBASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28043E0CXC2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms