Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm7889-201ENSMUST00000185591 958 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm9182-201ENSMUST00000217829 639 ntBASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm15165-201ENSMUST00000118140 502 ntBASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccnb1ip1D3Z3K2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm18489-201ENSMUST00000172565 551 ntBASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms