Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf11cB4XVP9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Gm18733-201ENSMUST00000173950 856 ntBASIC13.32□□□□□ -0.28
Phf11cB4XVP9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Phf11cB4XVP9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm5364-201ENSMUST00000216789 889 ntBASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Phf11cB4XVP9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Gm20553-201ENSMUST00000204205 844 ntBASIC13.3□□□□□ -0.28
Phf11cB4XVP9 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Phf11cB4XVP9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms