Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm12384-201ENSMUST00000119228 919 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm19078-201ENSMUST00000206311 727 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col6a4A2AX52 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.84□□□□□ -0.51
Col6a4A2AX52 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Snora73a-201ENSMUST00000082453 205 ntBASIC11.83□□□□□ -0.51
Col6a4A2AX52 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a4A2AX52 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.83□□□□□ -0.52
Col6a4A2AX52 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.83□□□□□ -0.52
Col6a4A2AX52 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Gm27516-201ENSMUST00000184237 98 ntBASIC11.83□□□□□ -0.52
Col6a4A2AX52 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Gm40466-201ENSMUST00000212174 422 ntBASIC11.83□□□□□ -0.52
Col6a4A2AX52 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a4A2AX52 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms