Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc112A0AUP1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Gm38225-201ENSMUST00000194001 393 ntBASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc112A0AUP1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gm10175-201ENSMUST00000086013 645 ntBASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.04■□□□□ 0.16
Ccdc112A0AUP1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 BC001981-202ENSMUST00000191393 1545 ntBASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc112A0AUP1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Gm11779-201ENSMUST00000118541 368 ntBASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Gm14494-201ENSMUST00000118786 435 ntBASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccdc112A0AUP1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms