Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav6n-6A0A075B6B2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav6n-6A0A075B6B2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm9727-201ENSMUST00000161387 555 ntBASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm18246-201ENSMUST00000221023 728 ntBASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav6n-6A0A075B6B2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms