Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CcsQ9WU84 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
CcsQ9WU84 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CcsQ9WU84 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CcsQ9WU84 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
CcsQ9WU84 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.96□□□□□ -0.66
CcsQ9WU84 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CcsQ9WU84 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gm13036-201ENSMUST00000117799 748 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gm15358-201ENSMUST00000119249 520 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.95□□□□□ -0.66
CcsQ9WU84 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.95□□□□□ -0.66
CcsQ9WU84 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.95□□□□□ -0.66
CcsQ9WU84 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.95□□□□□ -0.66
CcsQ9WU84 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CcsQ9WU84 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.95□□□□□ -0.66
CcsQ9WU84 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CcsQ9WU84 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcsQ9WU84 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.94□□□□□ -0.66
CcsQ9WU84 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms