Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clcf1Q9QZM3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm23547-201ENSMUST00000158210 271 ntBASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Mir7684-201ENSMUST00000183858 60 ntBASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Mir8102-201ENSMUST00000184148 139 ntBASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm27989-201ENSMUST00000184721 107 ntBASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm9063-201ENSMUST00000223299 582 ntBASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clcf1Q9QZM3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Carlr-201ENSMUST00000181515 2574 ntBASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clcf1Q9QZM3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm12428-201ENSMUST00000119844 727 ntBASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm27631-201ENSMUST00000184163 466 ntBASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm7775-201ENSMUST00000218871 853 ntBASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.78□□□□□ -0.36
Clcf1Q9QZM3 Gm16476-201ENSMUST00000221544 139 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms