Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.22■□□□□ 0.67
Cpsf1Q9EPU4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm12390-201ENSMUST00000117897 397 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm7287-201ENSMUST00000205267 602 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf1Q9EPU4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Cpsf1Q9EPU4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Gm21451-201ENSMUST00000111062 2775 ntBASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Gm38223-201ENSMUST00000194484 695 ntBASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 AY702102-202ENSMUST00000194651 1173 ntBASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Gm44397-201ENSMUST00000195950 113 ntBASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf1Q9EPU4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Gm8598-201ENSMUST00000221184 836 ntBASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf1Q9EPU4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms