Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Gm7286-201ENSMUST00000182691 1007 ntBASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.36□□□□□ -0.91
Mrpl55Q9CZ83 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm11453-201ENSMUST00000117318 1007 ntBASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm4899-201ENSMUST00000178708 719 ntBASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Mrpl55Q9CZ83 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Mrpl55Q9CZ83 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms