Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Lsm7Q9CQQ8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm7Q9CQQ8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm7Q9CQQ8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm37917-201ENSMUST00000194711 392 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm8515-201ENSMUST00000194852 576 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm17795-201ENSMUST00000214505 757 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm7Q9CQQ8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm5745-201ENSMUST00000183748 313 ntBASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm15823-201ENSMUST00000064305 670 ntBASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm7Q9CQQ8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm7Q9CQQ8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm7Q9CQQ8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms